| Sunday Without God | July 6, 2013 | — | 12 |
| Sunset on Third Street | October 12, 1990 | — | 27 |
| Super Bikkuriman | May 17, 1992 | — | 44 |
| Super Cub | April 7, 2021 | — | 12 |
| Super Dimension Cavalry Southern Cross | April 15, 1984 | — | 23 |
| Super Dimension Century Orguss | July 3, 1983 | — | 35 |
| Super Dimension Century Orguss 02 | — | — | 6 |
| Super Dimension Fortress Macross | October 3, 1982 | — | 36 |
| Super Dimensional Fortress Macross II: Lovers Again | May 21, 1992 | — | — |
| Super Doll Licca-chan | October 6, 1998 | TV Tokyo | 52 |
| Super Dragon Ball Heroes | — | — | 56 |
| Super Express Hikarian | April 2, 1997 | — | 156 |
| Super Gals! Kotobuki Ran | April 1, 2001 | TV Tokyo | 52 |
| Super HxEros | July 4, 2020 | — | 12 |
| Super Jetter | January 7, 1965 | — | 52 |
| Super Life-Form Transformers: Beast Wars Neo | February 3, 1999 | TV Tokyo | 35 |
| Super Lovers | April 6, 2016 | — | — |
| Super Milk Chan | June 18, 1998 | — | — |
| Super Pig | September 3, 1994 | — | 51 |
| Super Psychic Policeman Chojo | October 6, 2026 | — | — |
| Super Radical Gag Family | June 30, 1998 | TBS Television | 33 |
| Super Robot Wars Original Generation: Divine Wars | October 4, 2006 | — | 25 |
| Super Robot Wars Original Generation: The Inspector | October 1, 2010 | — | 26 |
| Super Seisyun Brothers | September 13, 2013 | — | 14 |
| Super Yo-Yo | December 1, 1998 | — | 22 |
| Super Zugan | October 8, 1992 | Fuji Television | 21 |
| Superbook | October 9, 1981 | Christian Broadcasting Network | 52 |
| Supercrooks | — | Netflix | 13 |
| Superior Defender Gundam Force | September 1, 2003 | — | — |
| Supernatural: The Animation | February 23, 2011 | — | 22 |
| Suppose a Kid From the Last Dungeon Boonies Moved to a Starter Town | January 4, 2021 | — | 12 |
| Sushi and Beyond | April 12, 2015 | NHK General TV | 24 |
| Sushi Police | January 6, 2016 | — | — |
| Sushi Sumo | April 3, 2021 | — | 52 |
| Susie-chan to Marvy | April 5, 1999 | NHK Educational TV | 104 |
| Suteki! Sakura Mama | December 2, 2000 | BS Fuji | 18 |
| Suzakinishi the Animation | July 8, 2015 | — | 12 |
| Suzuka | July 7, 2005 | — | 26 |
| Sweet Blue Flowers | July 2, 2009 | Fuji Television | 11 |
| Sweet Reincarnation | July 4, 2023 | — | 12 |
| Sweet Valerian | August 1, 2004 | — | 26 |
| Sweetness and Lightning | July 4, 2016 | — | 12 |
| Sword Art Online | July 7, 2012 | Tokyo MX | 96 |
| Sword Art Online Alternative Gun Gale Online | April 8, 2018 | — | 12 |
| Sword Gai: The Animation | March 23, 2018 | Netflix | — |
| Sword of the Demon Hunter: Kijin Gentōshō | March 31, 2025 | — | 24 |
| Sword Oratoria: Is It Wrong to Try to Pick Up Girls in a Dungeon? On the Side | April 14, 2017 | — | 12 |
| Sylvanian Families | October 7, 2017 | TV Tokyo | — |
| Symphogear | January 6, 2012 | — | 65 |
| Synduality: Noir | July 11, 2023 | — | 24 |
| Sōten Kōro | April 8, 2009 | — | 26 |
| Sōya Monogatari | February 7, 1984 | — | 21 |
| T.P. Bon | May 2, 2024 | — | — |
| Taboo Tattoo | July 4, 2016 | — | 12 |
| Tachibanakan To Lie Angle | April 4, 2018 | — | 12 |
| Tactical Roar | January 8, 2006 | — | 13 |
| Tactics | October 5, 2004 | TV Tokyo | 25 |
| Tada Never Falls in Love | April 5, 2018 | AT-X | 13 |
| Tai Chi Chasers | April 29, 2007 | KBS 1TV | 39 |
| Taisho Mebiusline Chicchaisan | — | — | — |