| Shiba Inuko-san | April 1, 2012 | — | 26 |
| Shibawanko no Wa no Kokoro | April 5, 2006 | NHK General TV | 80 |
| Shigofumi: Letters from the Departed | January 6, 2008 | — | 12 |
| Shigurui | July 19, 2007 | Toku | 12 |
| Shiki | July 8, 2010 | Fuji Television | 22 |
| Shikimori's Not Just a Cutie | April 10, 2022 | — | 12 |
| Shikizakura | October 10, 2021 | Chūkyō Television Broadcasting | — |
| Shima Shima Tora no Shimajirō | December 13, 1993 | TV Setouchi | 726 |
| Shimajirō Hesoka | April 5, 2010 | TV Setouchi | 202 |
| Shimajirō no Wow! | April 2, 2012 | TV Setouchi | — |
| Shimoneta | July 4, 2015 | — | 12 |
| Shin Ace o Nerae! | October 14, 1978 | — | 25 |
| Shin Atashin'chi | October 6, 2015 | — | 26 |
| Shin Bikkuriman | April 19, 1989 | — | 72 |
| Shin Hakkenden | April 3, 1999 | TV Aichi | 26 |
| Shin Ikki Tousen | May 17, 2022 | — | 3 |
| Shin KochiKame: Tokyo Beat Cops | 2027 | Fuji Television | — |
| Shin Maple Town Monogatari: Palm Town-hen | — | — | — |
| Shin Oishinbo | — | — | — |
| Shin-Men | November 26, 2010 | — | — |
| Shine On! Bakumatsu Boys | July 8, 2022 | — | — |
| Shine Post | July 13, 2022 | — | 12 |
| Shingu: Secret of the Stellar Wars | May 8, 2001 | NHK Satellite 2 Television | — |
| Shining Hearts: Shiawase no Pan | April 13, 2012 | — | 12 |
| Shining Tears X Wind | April 6, 2007 | — | 13 |
| Shinkai Densetsu Meremanoid | October 1, 1997 | — | 24 |
| Shinkalion Change the World | April 7, 2024 | — | — |
| Shinkansen Henkei Robo Shinkalion | January 6, 2018 | — | — |
| Shinkyoku Sōkai Polyphonica | April 3, 2007 | — | 12 |
| Shinobanai! CryptoNinja Sakuya | October 4, 2023 | — | — |
| Shinobi no Ittoki | October 4, 2022 | — | 12 |
| Shinya! Tensai Bakabon | July 10, 2018 | TV Tokyo | 12 |
| Shinzo | February 5, 2000 | — | 32 |
| Shion no Ō | October 13, 2007 | Fuji Television | 22 |
| Shippū! Iron Leaguer | April 6, 1993 | — | 52 |
| Shirobako | October 9, 2014 | Tokyo MX | 24 |
| Shirogane no Ishi Argevollen | July 3, 2014 | — | — |
| Shironeko Project: Zero Chronicle | April 6, 2020 | — | 12 |
| Shogun in His Boyhood | April 9, 1975 | — | 20 |
| Shokupan Mimi | October 4, 2010 | — | 10 |
| Shomin Sample | October 7, 2015 | — | 12 |
| Shonen Ashibe Go! Go! Goma-chan | April 5, 2016 | — | 120 |
| Shoot! | November 7, 1993 | Fuji Television | 58 |
| Show by Rock!! | April 5, 2015 | — | 12 |
| Shrine of the Morning Mist | July 4, 2002 | — | 26 |
| Shuffle! | July 7, 2005 | WOWOW | 24 |
| Shugo Chara! | October 6, 2007 | TV Tokyo | 127 |
| Shukufuku no Campanella | July 2, 2010 | — | 12 |
| Shuudengo, Capsule Hotel de, Joushi ni Binetsu Tsutawaru Yoru. | October 8, 2018 | Tokyo MX | 12 |
| Shy | October 3, 2023 | — | 24 |
| Shō 3 Ashibe QQ Goma-chan | April 12, 2026 | TV Tokyo | — |
| Shōnen Ashibe | April 11, 1991 | TBS Television | 62 |
| Shōnen Hollywood | — | — | — |
| Shōnen Maid | April 8, 2016 | — | 12 |
| Shōnen Ninja Kaze no Fujimaru | June 7, 1964 | — | 65 |
| Shōnen Onmyōji | October 3, 2006 | Kansai Telecasting Corporation | 26 |
| Shōwa Ahō Zhoshi Akanuke Ichiban! | October 7, 1985 | — | 22 |
| Shōwa Genroku Rakugo Shinjū | January 9, 2016 | — | — |
| Shōwa Monogatari | April 4, 2011 | — | — |
| Shōzen | April 2027 | — | — |